1. Research

Publications

The Oryza BAC library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries

Jetty S.S. Ammiraju, Meizhong Luo, José L. Goicoechea, Wenming Wang, Dave Kudrna, Christopher Mueller, Jayson Talag, HyeRan Kim, Nicholas B. Sisneros, Barbara Blackmon, Eric Fang, Jeffery B. Tomkins, Darshan Brar, David MacKill, Susan McCouch, Nori Kurata
Georgina Lambert, David W. Galbraith, K. Arumuganathan, Kiran Rao, Jason G. Walling, Navdeep Gill, Yeisoo Yu, Phillip SanMiguel, Carol Soderlund, Scott Jackson, and Rod A. Wing
2006

Efficient insertional mutagenesis in rice using the maize En/Spm elements

Kumar CS, Wing RA, Sundaresan V
2005

Structure and architecture of the maize genome

Haberer G, Young S, Bharti AK, Gundlach H, Raymond C, Fuks G, Butler E, Wing RA, Rounsley S, Birren B, Nusbaum C, Mayer KF, Messing J
2005

Random sheared fosmid library as a new genomic tool to accelerate complete finishing of rice (Oryza sativa spp. Nipponbare) genome sequence: sequencing of gap-specific fosmid clones uncovers new euchromatic portions of the genome

Ammiraju JS, Yu Y, Luo M, Kudrna D, Kim H, Goicoechea JL, Katayose Y, Matsumoto T, Wu J, Sasaki T, Wing RA
2005

The oryza map alignment project: the golden path to unlocking the genetic potential of wild rice species

Wing RA, Ammiraju JS, Luo M, Kim H, Yu Y, Kudrna D, Goicoechea JL, Wang W, Nelson W, Rao K, Brar D, Mackill DJ, Han B, Soderlund C, Stein L, SanMiguel P, Jackson S
2005

Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species

The Rice Chromosome 3 Sequencing Consortium
2005

The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications

The Rice Chromosomes 11 and 12 Sequencing Consortia
2005

Comparative physical mapping links conservation of microsynteny to chromosome structure and recombination in grasses

Bowers JE, Arias MA, Asher R, Avise JA, Ball RT, Brewer GA, Buss RW, Chen AH, Edwards TM, Estill JC, Exum HE, Goff VH, Herrick KL, Steele CL, Karunakaran S, Lafayette GK, Lemke C, Marler BS, Masters SL, McMillan JM, Nelson LK, Newsome GA, Nwakanma CC
Odeh RN, Phelps CA, Rarick EA, Rogers CJ, Ryan SP, Slaughter KA, Soderlund CA, Tang H, Wing RA, Paterson AH
2005

The map-based sequence of the rice genome

International Rice Genome Sequencing Project
2005

Toward closing rice telomere gaps: mapping and sequence characterization of rice subtelomere regions

Yang TJ, Yu Y, Chang SB, de Jong H, Oh CS, Ahn SN, Fang E, Wing RA
2005

Large-Scale Identification of Expressed Sequence Tags Involved in Rice and Rice Blast Fungus Interaction

Chatchawan Jantasuriyarat, Malali Gowda, Karl Haller, Jamie Hatfield, Guodong Lu, Eric Stahlberg, Bo Zhou, Huameng Li, HyRan Kim, Yeisoo Yu, Ralph A. Dean, Rod A. Wing, Carol Soderlund and Guo-Liang Wang
2005

Bacterial artificial chromosome (BAC) library resource for positional cloning of pest and disease resistance genes in cassava (Manihot esculenta Crantz)

Tomkins J, Fregene M, Main D, Kim H, Wing R, Tohme J
2004

BAC end sequences and a physical map reveal transposable element content and clustering patterns in the genome of Magnaporthe grisea

Thon MR, Martin SL, Goff S, Wing RA, Dean RA
2004

Sequence analysis of the long arm of rice chromosome 11 for rice-wheat synteny

Singh NK, Raghuvanshi S, Srivastava SK, Gaur A, Pal AK, Dalal V, Singh A, Ghazi IA, Bhargav A, Yadav M, Dixit A, Batra K, Gaikwad K, Sharma TR, Mohanty A, Bharti AK, Kapur A, Gupta V, Kumar D, Vij S, Vydianathan R, Khurana P, Sharma S, McCombie WR
Messing J, Wing R, Sasaki T, Khurana P, Mohapatra T, Khurana JP, Tyagi AK
2004

Structural features of the rice chromosome 4 centromere

Zhang Y, Huang Y, Zhang L, Li Y, Lu T, Lu Y, Feng Q, Zhao Q, Cheng Z, Xue Y, Wing RA, Han B
2004

A new resource for cereal genomics: 22K barley GeneChip comes of age

Close TJ, Wanamaker SI, Caldo RA, Turner SM, Ashlock DA, Dickerson JA, Wing RA, Muehlbauer GJ, Kleinhofs A, Wise RP
2004

In-depth view of structure, activity, and evolution of rice chromosome 10

Rice Chromosome 10 Sequencing Consortium
2003

Resolution of fluorescence in-situ hybridization mapping on rice mitotic prometaphase chromosomes, meiotic pachytene chromosomes and extended DNA fibers

Cheng Z, Buell CR, Wing RA, Jiang J
2002

Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice

Jiang N, Bao Z, Temnykh S, Cheng Z, Jiang J, Wing RA, McCouch SR, Wessler SR
2002

A fine physical map of the rice chromosome 4

Zhao Q, Zhang Y, Cheng Z, Chen M, Wang S, Feng Q, Huang Y, Li Y, Tang Y, Zhou B, Chen Z, Yu S, Zhu J, Hu X, Mu J, Ying K, Hao P, Zhang L, Lu Y, Zhang LS, Liu Y, Yu Z, Fan D, Weng Q, Chen L, Lu T, Liu X, Jia P, Sun T, Wu Y, Zhang Y, Lu Y, Li C, Wang R
Lei H, Li T, Hu H, Wu M, Zhang R, Guan J, Zhu J, Fu G, Gu M, Hong G, Xue Y, Wing R, Jiang J, Han B
2002